Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 KRT18P35-201ENST00000510488 1269 ntBASIC15.17■□□□□ 0.02
HLA-DQA2P01906 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 MIR5100-201ENST00000579544 119 ntBASIC15.17■□□□□ 0.02
HLA-DQA2P01906 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 AC018695.7-201ENST00000624587 2492 ntBASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 NUS1P1-201ENST00000446295 882 ntBASIC15.16■□□□□ 0.02
HLA-DQA2P01906 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 NPAP1P7-201ENST00000613027 823 ntBASIC15.16■□□□□ 0.02
HLA-DQA2P01906 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQA2P01906 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 AL021920.2-201ENST00000624828 1351 ntBASIC15.15■□□□□ 0.02
HLA-DQA2P01906 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQA2P01906 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms