Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 AL590787.1-201ENST00000568856 1315 ntBASIC15.24■□□□□ 0.03
PPP1R3DO95685 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 ATP5G2P1-201ENST00000433580 426 ntBASIC15.24■□□□□ 0.03
PPP1R3DO95685 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 AL353135.1-201ENST00000606729 504 ntBASIC15.24■□□□□ 0.03
PPP1R3DO95685 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 PCDHA1-201ENST00000378133 2726 ntBASIC15.24■□□□□ 0.03
PPP1R3DO95685 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 AP005117.1-201ENST00000584346 1413 ntBASIC15.24■□□□□ 0.03
PPP1R3DO95685 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPP1R3DO95685 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AL513523.2-202ENST00000427283 2040 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC132008.2-207ENST00000454517 770 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 HLA-J-202ENST00000469281 1241 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 TERC-201ENST00000602385 541 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC091076.1-201ENST00000610741 619 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC005052.1-201ENST00000625181 2492 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC006538.1-201ENST00000567905 1585 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 AC011270.2-201ENST00000624293 2550 ntBASIC15.23■□□□□ 0.03
PPP1R3DO95685 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPP1R3DO95685 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PPP1R3DO95685 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PPP1R3DO95685 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP1R3DO95685 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP1R3DO95685 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP1R3DO95685 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms