Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC7.38□□□□□ -1.23
USH2AO75445 CLUHP6-201ENST00000580789 941 ntBASIC7.38□□□□□ -1.23
USH2AO75445 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USH2AO75445 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USH2AO75445 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 FTLP10-202ENST00000505798 471 ntBASIC7.37□□□□□ -1.23
USH2AO75445 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC7.37□□□□□ -1.23
USH2AO75445 AL391069.4-201ENST00000609583 481 ntBASIC7.37□□□□□ -1.23
USH2AO75445 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USH2AO75445 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 HLA-DQB1-201ENST00000374943 1656 ntBASIC7.37□□□□□ -1.23
USH2AO75445 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USH2AO75445 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 SOCS2P1-201ENST00000417727 557 ntBASIC7.37□□□□□ -1.23
USH2AO75445 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC7.37□□□□□ -1.23
USH2AO75445 MAX-210ENST00000555419 765 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 AC244669.2-201ENST00000612320 853 ntBASIC7.37□□□□□ -1.23
USH2AO75445 AL096828.3-201ENST00000615354 462 ntBASIC7.37□□□□□ -1.23
USH2AO75445 AP001505.2-201ENST00000616815 443 ntBASIC7.37□□□□□ -1.23
USH2AO75445 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC7.37□□□□□ -1.23
USH2AO75445 HLA-C-210ENST00000640219 976 ntBASIC7.37□□□□□ -1.23
USH2AO75445 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 EGFEM1P-202ENST00000431685 1563 ntBASIC7.37□□□□□ -1.23
USH2AO75445 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 KRT8P12-202ENST00000472924 1397 ntBASIC7.37□□□□□ -1.23
USH2AO75445 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 HNRNPA1P48-201ENST00000562726 1377 ntBASIC7.37□□□□□ -1.23
USH2AO75445 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC7.37□□□□□ -1.23
USH2AO75445 FTH1P14-201ENST00000482930 551 ntBASIC7.37□□□□□ -1.23
USH2AO75445 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC7.37□□□□□ -1.23
USH2AO75445 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USH2AO75445 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC7.37□□□□□ -1.23
USH2AO75445 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USH2AO75445 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC7.37□□□□□ -1.23
USH2AO75445 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 SDCCAG3P2-201ENST00000326105 1023 ntBASIC7.36□□□□□ -1.23
USH2AO75445 HLA-DQB2-229ENST00000411527 1059 ntBASIC7.36□□□□□ -1.23
USH2AO75445 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms