Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
PFDN1O60925 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
PFDN1O60925 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 AC027601.5-201ENST00000624065 2482 ntBASIC15.02■□□□□ -0
PFDN1O60925 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PFDN1O60925 UNC93B3-201ENST00000308076 687 ntBASIC15.02■□□□□ -0
PFDN1O60925 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 KRT18P68-201ENST00000392293 1000 ntBASIC15.02■□□□□ -0
PFDN1O60925 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.02■□□□□ -0
PFDN1O60925 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.02■□□□□ -0
PFDN1O60925 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.02■□□□□ -0
PFDN1O60925 AC024257.2-201ENST00000549699 147 ntBASIC15.02■□□□□ -0
PFDN1O60925 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.02■□□□□ -0
PFDN1O60925 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.02■□□□□ -0
PFDN1O60925 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.02■□□□□ -0
PFDN1O60925 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.02□□□□□ -0.01
PFDN1O60925 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 AL023775.1-201ENST00000454907 1746 ntBASIC15.02□□□□□ -0.01
PFDN1O60925 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PFDN1O60925 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PFDN1O60925 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PFDN1O60925 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PFDN1O60925 BEND3P1-201ENST00000421591 1944 ntBASIC15.02□□□□□ -0.01
PFDN1O60925 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.01□□□□□ -0.01
PFDN1O60925 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PFDN1O60925 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.01□□□□□ -0.01
PFDN1O60925 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.01□□□□□ -0.01
PFDN1O60925 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PFDN1O60925 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PFDN1O60925 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
PFDN1O60925 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.01□□□□□ -0.01
PFDN1O60925 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 AC099521.3-201ENST00000624251 2938 ntBASIC15□□□□□ -0.01
PFDN1O60925 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 POR-201ENST00000394893 2532 ntTSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
PFDN1O60925 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 TESC-206ENST00000541210 936 ntTSL 3 BASIC15□□□□□ -0.01
PFDN1O60925 AL136162.1-201ENST00000607711 1078 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms