Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC105020.1-201ENST00000435356 2205 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
OPHN1O60890 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.61■□□□□ 0.41
OPHN1O60890 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
OPHN1O60890 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.61■□□□□ 0.41
OPHN1O60890 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 NKAPP1-205ENST00000585790 367 ntBASIC17.61■□□□□ 0.41
OPHN1O60890 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.61■□□□□ 0.41
OPHN1O60890 AC073592.4-201ENST00000623827 446 ntBASIC17.61■□□□□ 0.41
OPHN1O60890 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
OPHN1O60890 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.61■□□□□ 0.41
OPHN1O60890 AC148477.5-201ENST00000625164 1645 ntBASIC17.61■□□□□ 0.41
OPHN1O60890 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OPHN1O60890 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 AC005915.1-201ENST00000624912 2018 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.6■□□□□ 0.41
OPHN1O60890 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
OPHN1O60890 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
OPHN1O60890 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 AC211486.1-202ENST00000416371 468 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 ACTG1P4-201ENST00000425123 1122 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.6■□□□□ 0.41
OPHN1O60890 DNAJB3-202ENST00000449667 1266 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 AC211476.1-201ENST00000503899 468 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.6■□□□□ 0.41
OPHN1O60890 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.6■□□□□ 0.41
OPHN1O60890 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
OPHN1O60890 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.6■□□□□ 0.41
OPHN1O60890 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 AP002414.3-201ENST00000589352 1468 ntBASIC17.6■□□□□ 0.41
OPHN1O60890 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.6■□□□□ 0.41
OPHN1O60890 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
OPHN1O60890 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
OPHN1O60890 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OPHN1O60890 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
OPHN1O60890 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.59■□□□□ 0.41
OPHN1O60890 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 AL391005.1-201ENST00000623953 2435 ntBASIC17.59■□□□□ 0.41
OPHN1O60890 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OPHN1O60890 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.59■□□□□ 0.41
OPHN1O60890 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
OPHN1O60890 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms