Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.54■□□□□ 0.72
CTNND1O60716 GAPDHP21-201ENST00000450301 1010 ntBASIC19.54■□□□□ 0.72
CTNND1O60716 PRYP6-201ENST00000514804 343 ntBASIC19.54■□□□□ 0.72
CTNND1O60716 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.54■□□□□ 0.72
CTNND1O60716 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.54■□□□□ 0.72
CTNND1O60716 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.54■□□□□ 0.72
CTNND1O60716 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.54■□□□□ 0.72
CTNND1O60716 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.54■□□□□ 0.72
CTNND1O60716 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CTNND1O60716 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CTNND1O60716 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.53■□□□□ 0.72
CTNND1O60716 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 AC124947.2-201ENST00000547118 1133 ntBASIC19.53■□□□□ 0.72
CTNND1O60716 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 AC009118.2-201ENST00000613275 655 ntBASIC19.53■□□□□ 0.72
CTNND1O60716 AL138828.2-201ENST00000615812 383 ntBASIC19.53■□□□□ 0.72
CTNND1O60716 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNND1O60716 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.53■□□□□ 0.72
CTNND1O60716 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 AC134043.2-201ENST00000624206 2238 ntBASIC19.53■□□□□ 0.72
CTNND1O60716 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTNND1O60716 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNND1O60716 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CTNND1O60716 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNND1O60716 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
CTNND1O60716 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNND1O60716 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNND1O60716 LINC02012-201ENST00000608206 1725 ntBASIC19.52■□□□□ 0.72
CTNND1O60716 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 HLA-H-201ENST00000383620 1096 ntBASIC19.52■□□□□ 0.72
CTNND1O60716 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNND1O60716 HLA-V-204ENST00000476601 1289 ntBASIC19.52■□□□□ 0.72
CTNND1O60716 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.52■□□□□ 0.72
CTNND1O60716 SPDYE12P-201ENST00000618416 771 ntBASIC19.52■□□□□ 0.72
CTNND1O60716 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CTNND1O60716 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNND1O60716 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CTNND1O60716 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTNND1O60716 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTNND1O60716 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CTNND1O60716 TUBB8P12-201ENST00000308911 1335 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 TUBB7P-202ENST00000428444 1305 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 TUBB8P7-204ENST00000567960 1332 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTNND1O60716 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNND1O60716 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 PIN1P1-201ENST00000412108 996 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms