Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.28□□□□□ -0.28
CUBNO60494 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CUBNO60494 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 ACTBP11-201ENST00000436287 1126 ntBASIC13.28□□□□□ -0.28
CUBNO60494 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.28□□□□□ -0.28
CUBNO60494 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 AC093525.8-201ENST00000624099 1342 ntBASIC13.28□□□□□ -0.28
CUBNO60494 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.28□□□□□ -0.28
CUBNO60494 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CUBNO60494 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.28□□□□□ -0.28
CUBNO60494 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CUBNO60494 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.27□□□□□ -0.28
CUBNO60494 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.27□□□□□ -0.28
CUBNO60494 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CUBNO60494 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.27□□□□□ -0.28
CUBNO60494 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.27□□□□□ -0.28
CUBNO60494 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CUBNO60494 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.27□□□□□ -0.28
CUBNO60494 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.27□□□□□ -0.28
CUBNO60494 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.27□□□□□ -0.28
CUBNO60494 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.27□□□□□ -0.28
CUBNO60494 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CUBNO60494 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CUBNO60494 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 MTND6P24-201ENST00000440466 518 ntBASIC13.27□□□□□ -0.29
CUBNO60494 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.27□□□□□ -0.29
CUBNO60494 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.27□□□□□ -0.29
CUBNO60494 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 AC044860.1-202ENST00000559481 777 ntBASIC13.27□□□□□ -0.29
CUBNO60494 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.27□□□□□ -0.29
CUBNO60494 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
CUBNO60494 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CUBNO60494 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CUBNO60494 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CUBNO60494 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CUBNO60494 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CUBNO60494 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CUBNO60494 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.26□□□□□ -0.29
CUBNO60494 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CUBNO60494 FAM220BP-201ENST00000377689 816 ntBASIC13.26□□□□□ -0.29
CUBNO60494 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CUBNO60494 AL512361.1-201ENST00000554200 418 ntBASIC13.26□□□□□ -0.29
CUBNO60494 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms