Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KDELR3O43731 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.01■□□□□ 0.31
KDELR3O43731 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
KDELR3O43731 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 ELL2P1-201ENST00000413990 1906 ntBASIC17.01■□□□□ 0.31
KDELR3O43731 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.01■□□□□ 0.31
KDELR3O43731 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PKD1P1-201ENST00000458669 6805 ntBASIC17.01■□□□□ 0.31
KDELR3O43731 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
KDELR3O43731 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDELR3O43731 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.01■□□□□ 0.31
KDELR3O43731 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17■□□□□ 0.31
KDELR3O43731 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17■□□□□ 0.31
KDELR3O43731 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17■□□□□ 0.31
KDELR3O43731 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KDELR3O43731 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDELR3O43731 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17■□□□□ 0.31
KDELR3O43731 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.99■□□□□ 0.31
KDELR3O43731 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 AL671277.1-201ENST00000429656 993 ntBASIC16.99■□□□□ 0.31
KDELR3O43731 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 CEND1P1-201ENST00000451006 455 ntBASIC16.99■□□□□ 0.31
KDELR3O43731 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.99■□□□□ 0.31
KDELR3O43731 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KDELR3O43731 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms