Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC211486.1-202ENST00000416371 468 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 AC211476.1-201ENST00000503899 468 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2AO43633 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.89■□□□□ 0.61
CHMP2AO43633 AP001350.2-201ENST00000625104 1094 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 AC134684.3-201ENST00000641758 218 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 AC092902.6-201ENST00000641783 218 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHMP2AO43633 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 AC105020.1-201ENST00000435356 2205 ntBASIC18.89■□□□□ 0.61
CHMP2AO43633 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP2AO43633 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP2AO43633 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 AL645728.1-201ENST00000366221 2101 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 AL671710.1-201ENST00000610245 2349 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 AC140658.5-201ENST00000438532 169 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.88■□□□□ 0.61
CHMP2AO43633 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 AC004967.1-201ENST00000453589 447 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 AC112191.1-201ENST00000523689 701 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHMP2AO43633 MIR4492-201ENST00000581627 80 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP2AO43633 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHMP2AO43633 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 ELL2P1-201ENST00000413990 1906 ntBASIC18.88■□□□□ 0.61
CHMP2AO43633 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP2AO43633 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHMP2AO43633 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CHMP2AO43633 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.87■□□□□ 0.61
CHMP2AO43633 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHMP2AO43633 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.87■□□□□ 0.61
CHMP2AO43633 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.87■□□□□ 0.61
CHMP2AO43633 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP2AO43633 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP2AO43633 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP2AO43633 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CHMP2AO43633 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CHMP2AO43633 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 AL391256.1-201ENST00000443260 1855 ntBASIC18.86■□□□□ 0.61
CHMP2AO43633 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2AO43633 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2AO43633 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2AO43633 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms