Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 SPDYE11-202ENST00000450699 704 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.94■□□□□ 0.3
SMAD6O43541 AC079140.1-201ENST00000508039 487 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.94■□□□□ 0.3
SMAD6O43541 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.94■□□□□ 0.3
SMAD6O43541 FAM86C2P-203ENST00000528684 1004 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.94■□□□□ 0.3
SMAD6O43541 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 AC093520.2-201ENST00000561830 333 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 SPDYE9P-201ENST00000570642 692 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 SPDYE10P-202ENST00000612005 668 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 SPDYE8P-202ENST00000612377 668 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMAD6O43541 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.94■□□□□ 0.3
SMAD6O43541 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 AC016027.1-202ENST00000607927 1699 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
SMAD6O43541 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.93■□□□□ 0.3
SMAD6O43541 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 WASH6P-202ENST00000359512 1437 ntBASIC16.93■□□□□ 0.3
SMAD6O43541 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMAD6O43541 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 AKAP8P1-201ENST00000434743 1349 ntBASIC16.93■□□□□ 0.3
SMAD6O43541 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
SMAD6O43541 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD6O43541 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD6O43541 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SMAD6O43541 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.92■□□□□ 0.3
SMAD6O43541 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.92■□□□□ 0.3
SMAD6O43541 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 AC004835.2-201ENST00000603762 682 ntBASIC16.92■□□□□ 0.3
SMAD6O43541 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 KRT8P39-201ENST00000396270 1433 ntBASIC16.92■□□□□ 0.3
SMAD6O43541 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMAD6O43541 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMAD6O43541 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD6O43541 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms