Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.89■□□□□ 0.45
TNRC18O15417 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNRC18O15417 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNRC18O15417 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNRC18O15417 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNRC18O15417 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 NUP210P1-202ENST00000504322 710 ntBASIC17.88■□□□□ 0.45
TNRC18O15417 AC044849.1-201ENST00000519737 1188 ntBASIC17.88■□□□□ 0.45
TNRC18O15417 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 NPM1P43-201ENST00000558669 786 ntBASIC17.88■□□□□ 0.45
TNRC18O15417 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 AC138649.2-201ENST00000615886 705 ntBASIC17.88■□□□□ 0.45
TNRC18O15417 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
TNRC18O15417 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TNRC18O15417 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNRC18O15417 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TNRC18O15417 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.88■□□□□ 0.45
TNRC18O15417 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 AL139008.1-201ENST00000437894 228 ntBASIC17.88■□□□□ 0.45
TNRC18O15417 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.88■□□□□ 0.45
TNRC18O15417 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.88■□□□□ 0.45
TNRC18O15417 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TNRC18O15417 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.88■□□□□ 0.45
TNRC18O15417 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.88■□□□□ 0.45
TNRC18O15417 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.88■□□□□ 0.45
TNRC18O15417 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TNRC18O15417 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNRC18O15417 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TNRC18O15417 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNRC18O15417 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.87■□□□□ 0.45
TNRC18O15417 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 RN7SL596P-201ENST00000582123 288 ntBASIC17.87■□□□□ 0.45
TNRC18O15417 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.87■□□□□ 0.45
TNRC18O15417 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.87■□□□□ 0.45
TNRC18O15417 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.87■□□□□ 0.45
TNRC18O15417 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.87■□□□□ 0.45
TNRC18O15417 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.87■□□□□ 0.45
TNRC18O15417 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNRC18O15417 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.87■□□□□ 0.45
TNRC18O15417 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.87■□□□□ 0.45
TNRC18O15417 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNRC18O15417 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNRC18O15417 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNRC18O15417 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNRC18O15417 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNRC18O15417 RPSAP36-202ENST00000494591 1261 ntBASIC17.86■□□□□ 0.45
TNRC18O15417 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.86■□□□□ 0.45
TNRC18O15417 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TNRC18O15417 AC036164.1-201ENST00000570544 333 ntBASIC17.86■□□□□ 0.45
TNRC18O15417 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.86■□□□□ 0.45
TNRC18O15417 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.86■□□□□ 0.45
TNRC18O15417 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.86■□□□□ 0.45
TNRC18O15417 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.86■□□□□ 0.45
TNRC18O15417 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNRC18O15417 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.86■□□□□ 0.45
TNRC18O15417 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms