Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NDUFA1O15239 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NDUFA1O15239 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.57□□□□□ -0.56
NDUFA1O15239 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 HBZP1-201ENST00000354915 429 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 TSPY5P-201ENST00000426936 936 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 AC117947.1-201ENST00000427448 529 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.56□□□□□ -0.56
NDUFA1O15239 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 AC112907.2-201ENST00000448639 330 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 GUSBP12-201ENST00000513727 720 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
NDUFA1O15239 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.56□□□□□ -0.56
NDUFA1O15239 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.56□□□□□ -0.56
NDUFA1O15239 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 ALOX12P2-203ENST00000570921 1945 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 TUBB8P12-201ENST00000308911 1335 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 TUBB7P-202ENST00000428444 1305 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 TUBB8P7-204ENST00000567960 1332 ntBASIC11.56□□□□□ -0.56
NDUFA1O15239 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
NDUFA1O15239 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NDUFA1O15239 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.56□□□□□ -0.56
NDUFA1O15239 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
NDUFA1O15239 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
NDUFA1O15239 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.55□□□□□ -0.56
NDUFA1O15239 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.55□□□□□ -0.56
NDUFA1O15239 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NDUFA1O15239 AK4P3-201ENST00000418260 669 ntBASIC11.55□□□□□ -0.56
NDUFA1O15239 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.55□□□□□ -0.56
NDUFA1O15239 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
NDUFA1O15239 LINC01238-205ENST00000567549 1107 ntBASIC11.55□□□□□ -0.56
NDUFA1O15239 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.55□□□□□ -0.56
NDUFA1O15239 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
NDUFA1O15239 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NDUFA1O15239 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.55□□□□□ -0.56
NDUFA1O15239 AC099063.4-201ENST00000641099 1602 ntBASIC11.55□□□□□ -0.56
NDUFA1O15239 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms