Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC073439.1-201ENST00000624121 1774 ntBASIC21.47■■□□□ 1.03
CHL1O00533 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.47■■□□□ 1.03
CHL1O00533 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 IGHV3-62-201ENST00000520057 340 ntBASIC21.47■■□□□ 1.03
CHL1O00533 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 AL512356.2-201ENST00000546955 174 ntBASIC21.47■■□□□ 1.03
CHL1O00533 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.47■■□□□ 1.03
CHL1O00533 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 AC093028.1-201ENST00000622998 982 ntBASIC21.47■■□□□ 1.03
CHL1O00533 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 LINC00628-201ENST00000628516 1289 ntBASIC21.47■■□□□ 1.03
CHL1O00533 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHL1O00533 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHL1O00533 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CHL1O00533 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 KRT18P32-201ENST00000424695 1287 ntBASIC21.46■■□□□ 1.03
CHL1O00533 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.46■■□□□ 1.03
CHL1O00533 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.46■■□□□ 1.03
CHL1O00533 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.46■■□□□ 1.03
CHL1O00533 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 AGGF1P2-201ENST00000426656 2106 ntBASIC21.46■■□□□ 1.03
CHL1O00533 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
CHL1O00533 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHL1O00533 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHL1O00533 UXT-AS1-201ENST00000590504 1525 ntBASIC21.45■■□□□ 1.02
CHL1O00533 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.45■■□□□ 1.02
CHL1O00533 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.45■■□□□ 1.02
CHL1O00533 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.45■■□□□ 1.02
CHL1O00533 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.45■■□□□ 1.02
CHL1O00533 AC027796.2-201ENST00000575326 344 ntBASIC21.45■■□□□ 1.02
CHL1O00533 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHL1O00533 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CHL1O00533 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CHL1O00533 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHL1O00533 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHL1O00533 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHL1O00533 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHL1O00533 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHL1O00533 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHL1O00533 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms