Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC008667.4-201ENST00000607370 168 ntBASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC117500.6-201ENST00000624871 588 ntBASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AL118508.1-201ENST00000613502 2345 ntBASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 HLA-A-202ENST00000376806 1854 ntBASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC009078.2-202ENST00000463353 338 ntBASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PGM5P2-202ENST00000637225 1043 ntBASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 IGHV3-65-201ENST00000523210 341 ntBASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 REXO1L3P-201ENST00000622202 1288 ntBASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 LINC00895-201ENST00000629028 1637 ntBASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AP001005.1-201ENST00000571755 1248 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms