Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 AC009542.2-202ENST00000619004 1067 ntBASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88BA6NKF7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM88BA6NKF7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AC133539.2-201ENST00000604757 467 ntBASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AL022328.3-201ENST00000607943 679 ntBASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 AC074044.1-201ENST00000609673 707 ntBASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88BA6NKF7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 MIR4722-201ENST00000578292 60 ntBASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88BA6NKF7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 AC079316.1-201ENST00000548397 411 ntBASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 AC024267.1-201ENST00000582320 895 ntBASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms