Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 FOXO1B-201ENST00000504678 1527 ntBASIC14.68□□□□□ -0.06
MBD3L3A6NE82 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 MIR4453-201ENST00000584019 89 ntBASIC14.68□□□□□ -0.06
MBD3L3A6NE82 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 FO538757.1-201ENST00000623083 1397 ntBASIC14.68□□□□□ -0.06
MBD3L3A6NE82 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
MBD3L3A6NE82 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 INGX-202ENST00000489074 768 ntBASIC14.67□□□□□ -0.06
MBD3L3A6NE82 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MBD3L3A6NE82 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC139713.2-201ENST00000641328 2723 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 FAM220BP-201ENST00000377689 816 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 IGHV3-42-201ENST00000520410 361 ntBASIC14.66□□□□□ -0.06
MBD3L3A6NE82 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.66□□□□□ -0.06
MBD3L3A6NE82 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms