Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.78□□□□□ -0.2
DUXBA0A1W2PPF3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.77□□□□□ -0.2
DUXBA0A1W2PPF3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DUXBA0A1W2PPF3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DUXBA0A1W2PPF3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
DUXBA0A1W2PPF3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.77□□□□□ -0.2
DUXBA0A1W2PPF3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SLC25A3P1-201ENST00000443844 931 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 HOMER2P1-201ENST00000455653 964 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 RN7SL606P-201ENST00000472779 293 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 RNF126P1-202ENST00000569893 925 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC145285.6-201ENST00000604632 637 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 GGT4P-201ENST00000623672 1708 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 AC073592.5-201ENST00000624854 528 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 PAUPAR-201ENST00000630360 2965 ntBASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
DUXBA0A1W2PPF3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC006449.6-201ENST00000612330 2296 ntBASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC022532.1-201ENST00000624563 1728 ntBASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 AC011840.4-201ENST00000578471 627 ntBASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.76□□□□□ -0.21
DUXBA0A1W2PPF3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms