Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC004706.3-202ENST00000621574 984 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AF228730.7-201ENST00000641842 219 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AL356309.3-201ENST00000624132 1934 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC010654.1-201ENST00000615722 808 ntBASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 PCGF3-213ENST00000620529 1899 ntBASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-3A0A0A0MS03 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AL596257.1-201ENST00000641463 2694 ntBASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 LINC01144-201ENST00000626198 1710 ntBASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 PTCHD3P3-201ENST00000403073 906 ntBASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC107918.2-201ENST00000530817 355 ntBASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 CYP2A7P1-201ENST00000595391 815 ntBASIC15.72■□□□□ 0.11
TRBV5-3A0A0A0MS03 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms