Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.22■□□□□ 0.67
CLIC4Q9Y696 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 EMBP1-201ENST00000458200 901 ntBASIC19.21■□□□□ 0.67
CLIC4Q9Y696 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AC107918.2-201ENST00000530817 355 ntBASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLIC4Q9Y696 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CLIC4Q9Y696 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 HNRNPDP1-201ENST00000439535 754 ntBASIC19.2■□□□□ 0.66
CLIC4Q9Y696 RPS15P9-201ENST00000494093 319 ntBASIC19.2■□□□□ 0.66
CLIC4Q9Y696 RNPS1P1-201ENST00000507437 918 ntBASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 OR7E14P-202ENST00000530490 1290 ntBASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AC006557.2-201ENST00000592985 1240 ntBASIC19.2■□□□□ 0.66
CLIC4Q9Y696 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIC4Q9Y696 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 GGT3P-204ENST00000453783 1664 ntBASIC19.19■□□□□ 0.66
CLIC4Q9Y696 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms