Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.83□□□□□ -0.2
RCL1Q9Y2P8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 HMGA1P5-201ENST00000412453 271 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 ECEL1P3-201ENST00000427961 737 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 RASA4DP-201ENST00000460726 1199 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 ECEL1P2-202ENST00000465689 757 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 AC142381.4-202ENST00000563973 229 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 AL353692.3-201ENST00000407031 1396 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 AL135999.2-201ENST00000622438 1686 ntBASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RCL1Q9Y2P8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms