Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FNDC3AQ9Y2H6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 CNN2P11-201ENST00000429351 262 ntBASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FNDC3AQ9Y2H6 GPR89P-201ENST00000407924 1495 ntBASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 AC116353.5-201ENST00000638148 1699 ntBASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 RPS15P9-201ENST00000494093 319 ntBASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 IGHV3-65-201ENST00000523210 341 ntBASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
FNDC3AQ9Y2H6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 AC092053.1-201ENST00000605787 1936 ntBASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 NCF1C-201ENST00000438382 1427 ntBASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FNDC3AQ9Y2H6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms