Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.35■■□□□ 1.01
TNNQ9UQP3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TNNQ9UQP3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNNQ9UQP3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.35■■□□□ 1.01
TNNQ9UQP3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TNNQ9UQP3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 AL353732.1-201ENST00000569618 1459 ntBASIC21.34■■□□□ 1.01
TNNQ9UQP3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 HMGA1P7-201ENST00000406908 502 ntBASIC21.34■■□□□ 1.01
TNNQ9UQP3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 CXCL1P1-201ENST00000502804 216 ntBASIC21.34■■□□□ 1.01
TNNQ9UQP3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNNQ9UQP3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.34■■□□□ 1.01
TNNQ9UQP3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 AC129492.6-201ENST00000611383 1305 ntBASIC21.33■■□□□ 1.01
TNNQ9UQP3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 PRSS29P-201ENST00000440800 595 ntBASIC21.33■■□□□ 1.01
TNNQ9UQP3 AC093909.1-201ENST00000504731 1122 ntBASIC21.33■■□□□ 1.01
TNNQ9UQP3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 AC091167.2-201ENST00000579581 588 ntBASIC21.33■■□□□ 1.01
TNNQ9UQP3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNNQ9UQP3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TNNQ9UQP3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TNNQ9UQP3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TNNQ9UQP3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TNNQ9UQP3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
TNNQ9UQP3 AC008741.2-201ENST00000612792 3115 ntBASIC21.33■■□□□ 1
TNNQ9UQP3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
TNNQ9UQP3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.32■■□□□ 1
TNNQ9UQP3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.32■■□□□ 1
TNNQ9UQP3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TNNQ9UQP3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TNNQ9UQP3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.32■■□□□ 1
TNNQ9UQP3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.32■■□□□ 1
TNNQ9UQP3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TNNQ9UQP3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TNNQ9UQP3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNNQ9UQP3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNNQ9UQP3 GGT3P-204ENST00000453783 1664 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms