Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AC008735.3-201ENST00000596646 500 ntBASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 TUBB1P2-201ENST00000422712 1306 ntBASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 TUBB1P1-201ENST00000503144 1300 ntBASIC20.19■□□□□ 0.82
ZC3H4Q9UPT8 REXO1L11P-201ENST00000620964 1927 ntBASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 ANKRD19P-201ENST00000338192 862 ntBASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 MIR1908-201ENST00000410394 80 ntBASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 SERBP1P3-201ENST00000459980 809 ntBASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 AL512361.1-201ENST00000554200 418 ntBASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H4Q9UPT8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 KRT43P-201ENST00000434019 910 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 SPDYE18-201ENST00000510091 1050 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 RN7SL219P-201ENST00000582872 296 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 CTBP2P3-201ENST00000585629 1255 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 SRD5A3P1-201ENST00000603021 949 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 AC093726.1-201ENST00000608064 963 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 GPR182-203ENST00000622922 591 ntBASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H4Q9UPT8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H4Q9UPT8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H4Q9UPT8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H4Q9UPT8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H4Q9UPT8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms