Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC106730.1-201ENST00000566722 1090 ntBASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 AC010654.1-201ENST00000615722 808 ntBASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.57■□□□□ 0.4
PPARGC1AQ9UBK2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 SLC25A6P2-201ENST00000497974 877 ntBASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 SLC25A1P1-201ENST00000528351 927 ntBASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 AC046158.3-201ENST00000624947 2558 ntBASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PPARGC1AQ9UBK2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 ZNF259P1-201ENST00000407656 1365 ntBASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 AC002310.6-201ENST00000624451 1377 ntBASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 OR7E47P-204ENST00000575924 449 ntBASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms