Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT4Q9P109 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GCNT4Q9P109 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT4Q9P109 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GCNT4Q9P109 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
GCNT4Q9P109 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GCNT4Q9P109 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
GCNT4Q9P109 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
GCNT4Q9P109 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AP002414.3-201ENST00000589352 1468 ntBASIC18.34■□□□□ 0.53
GCNT4Q9P109 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC104109.2-201ENST00000602919 1418 ntBASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC087163.2-201ENST00000457299 853 ntBASIC18.34■□□□□ 0.53
GCNT4Q9P109 POLD2P1-201ENST00000511220 997 ntBASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AL805961.1-202ENST00000641562 540 ntBASIC18.34■□□□□ 0.53
GCNT4Q9P109 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCNT4Q9P109 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.34■□□□□ 0.53
GCNT4Q9P109 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.33■□□□□ 0.53
GCNT4Q9P109 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.33■□□□□ 0.53
GCNT4Q9P109 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.33■□□□□ 0.53
GCNT4Q9P109 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCNT4Q9P109 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 PI4KAP1-204ENST00000612579 1703 ntBASIC18.33■□□□□ 0.52
GCNT4Q9P109 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 KRT18P27-201ENST00000427733 1299 ntBASIC18.33■□□□□ 0.52
GCNT4Q9P109 RNA5SP415-201ENST00000517246 115 ntBASIC18.33■□□□□ 0.52
GCNT4Q9P109 AC034105.1-201ENST00000563488 319 ntBASIC18.33■□□□□ 0.52
GCNT4Q9P109 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 AC006538.3-201ENST00000612495 578 ntBASIC18.33■□□□□ 0.52
GCNT4Q9P109 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCNT4Q9P109 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.33■□□□□ 0.52
GCNT4Q9P109 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCNT4Q9P109 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCNT4Q9P109 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCNT4Q9P109 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCNT4Q9P109 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
GCNT4Q9P109 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms