Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.91□□□□□ -0.02
KIAA1549Q9HCM3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 GGT3P-204ENST00000453783 1664 ntBASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 AGGF1P2-201ENST00000426656 2106 ntBASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KIAA1549Q9HCM3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC016027.1-202ENST00000607927 1699 ntBASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC004835.2-201ENST00000603762 682 ntBASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC006277.1-201ENST00000624348 1610 ntBASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KIAA1549Q9HCM3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 PCGF3-213ENST00000620529 1899 ntBASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 UXT-AS1-201ENST00000590504 1525 ntBASIC14.88□□□□□ -0.03
KIAA1549Q9HCM3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms