Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SND1-IT1Q9HBX3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SND1-IT1Q9HBX3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.33□□□□□ -0.59
SND1-IT1Q9HBX3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AC079602.3-201ENST00000623931 403 ntBASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 HLA-A-202ENST00000376806 1854 ntBASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SND1-IT1Q9HBX3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms