Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP110Q9HB58 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.26■□□□□ 0.35
SP110Q9HB58 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.26■□□□□ 0.35
SP110Q9HB58 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP110Q9HB58 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
SP110Q9HB58 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP110Q9HB58 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SP110Q9HB58 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SP110Q9HB58 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP110Q9HB58 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SP110Q9HB58 AL353732.1-201ENST00000569618 1459 ntBASIC17.25■□□□□ 0.35
SP110Q9HB58 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.25■□□□□ 0.35
SP110Q9HB58 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 PRORSD1P-202ENST00000563365 2154 ntBASIC17.25■□□□□ 0.35
SP110Q9HB58 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
SP110Q9HB58 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.25■□□□□ 0.35
SP110Q9HB58 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.25■□□□□ 0.35
SP110Q9HB58 IGLL3P-201ENST00000412472 434 ntBASIC17.25■□□□□ 0.35
SP110Q9HB58 MED15P5-201ENST00000423150 992 ntBASIC17.25■□□□□ 0.35
SP110Q9HB58 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
SP110Q9HB58 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.25■□□□□ 0.35
SP110Q9HB58 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.25■□□□□ 0.35
SP110Q9HB58 MPDU1-223ENST00000582151 728 ntBASIC17.25■□□□□ 0.35
SP110Q9HB58 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.25■□□□□ 0.35
SP110Q9HB58 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.25■□□□□ 0.35
SP110Q9HB58 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP110Q9HB58 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 AC106886.4-201ENST00000623557 2502 ntBASIC17.24■□□□□ 0.35
SP110Q9HB58 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.24■□□□□ 0.35
SP110Q9HB58 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.24■□□□□ 0.35
SP110Q9HB58 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 AC027601.4-201ENST00000611259 610 ntBASIC17.24■□□□□ 0.35
SP110Q9HB58 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.24■□□□□ 0.35
SP110Q9HB58 AC010507.1-201ENST00000633895 436 ntBASIC17.24■□□□□ 0.35
SP110Q9HB58 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.24■□□□□ 0.35
SP110Q9HB58 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SP110Q9HB58 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 AL391256.1-201ENST00000443260 1855 ntBASIC17.24■□□□□ 0.35
SP110Q9HB58 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SP110Q9HB58 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
SP110Q9HB58 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP110Q9HB58 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SP110Q9HB58 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
SP110Q9HB58 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SP110Q9HB58 PMS2P1-201ENST00000431037 1228 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 AL591424.1-201ENST00000442569 1213 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 FAM185BP-201ENST00000443595 716 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 RNA5SP416-201ENST00000516838 111 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 AC140113.2-201ENST00000604370 208 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 ACTL9-202ENST00000612068 1252 ntBASIC17.23■□□□□ 0.35
SP110Q9HB58 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 AC131009.4-201ENST00000624048 1740 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms