Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
BRF2Q9HAW0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BRF2Q9HAW0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
BRF2Q9HAW0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRF2Q9HAW0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRF2Q9HAW0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 HCG4-201ENST00000418983 998 ntBASIC16.09■□□□□ 0.17
BRF2Q9HAW0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 AP001350.2-201ENST00000625104 1094 ntBASIC16.09■□□□□ 0.17
BRF2Q9HAW0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
BRF2Q9HAW0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 GGT3P-204ENST00000453783 1664 ntBASIC16.08■□□□□ 0.17
BRF2Q9HAW0 SLC22A20-204ENST00000530038 1673 ntBASIC16.08■□□□□ 0.17
BRF2Q9HAW0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BRF2Q9HAW0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 HNRNPDP1-201ENST00000439535 754 ntBASIC16.08■□□□□ 0.16
BRF2Q9HAW0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AC087641.1-201ENST00000557561 1021 ntBASIC16.08■□□□□ 0.16
BRF2Q9HAW0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AC005593.1-201ENST00000624894 515 ntBASIC16.08■□□□□ 0.16
BRF2Q9HAW0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRF2Q9HAW0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 AC004870.1-201ENST00000315132 882 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 PMS2P1-201ENST00000431037 1228 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 FAAHP1-202ENST00000446499 1238 ntBASIC16.07■□□□□ 0.16
BRF2Q9HAW0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.07■□□□□ 0.16
BRF2Q9HAW0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms