Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 IGHV3-62-201ENST00000520057 340 ntBASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 AC005498.2-205ENST00000593218 784 ntBASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 PP12613-201ENST00000424958 2230 ntBASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRN3Q9H3W5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 HCG4-201ENST00000418983 998 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 FAM58DP-201ENST00000428076 619 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 SPCS2P4-201ENST00000436160 681 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 CNN2P2-201ENST00000443536 909 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 CNN2P3-201ENST00000450201 906 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 AL136317.3-201ENST00000618497 906 ntBASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRN3Q9H3W5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 EGFEM1P-202ENST00000431685 1563 ntBASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 AC092474.2-201ENST00000424288 719 ntBASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 AC109635.5-201ENST00000533593 962 ntBASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 AP001059.3-201ENST00000619053 235 ntBASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
LRRN3Q9H3W5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRN3Q9H3W5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
LRRN3Q9H3W5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LRRN3Q9H3W5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms