Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 SAPCD2P3-201ENST00000455031 850 ntBASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 AC139887.3-201ENST00000568585 713 ntBASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 AC064862.7-201ENST00000604520 867 ntBASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AL139424.1-201ENST00000607572 797 ntBASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AL590787.1-201ENST00000568856 1315 ntBASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC68Q9H2F9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 FGFR3P6-201ENST00000457012 610 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 KRT18P56-201ENST00000507275 550 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 CLEC4GP1-201ENST00000596555 870 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MTDHP4-201ENST00000600287 670 ntBASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms