Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.94□□□□□ -0.02
MMP28Q9H239 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.94□□□□□ -0.02
MMP28Q9H239 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
MMP28Q9H239 AL157888.1-201ENST00000631930 593 ntBASIC14.94□□□□□ -0.02
MMP28Q9H239 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP28Q9H239 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.94□□□□□ -0.02
MMP28Q9H239 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MMP28Q9H239 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP28Q9H239 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 RNF152P1-201ENST00000397754 604 ntBASIC14.93□□□□□ -0.02
MMP28Q9H239 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC063952.2-201ENST00000498792 1227 ntBASIC14.93□□□□□ -0.02
MMP28Q9H239 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP28Q9H239 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP28Q9H239 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MMP28Q9H239 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.93□□□□□ -0.02
MMP28Q9H239 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP28Q9H239 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP28Q9H239 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MMP28Q9H239 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 SLC25A1P3-201ENST00000395415 828 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 STARP1-201ENST00000397973 869 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 TSPY5P-201ENST00000426936 936 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP28Q9H239 HOMER2P1-201ENST00000455653 964 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 RASA4DP-201ENST00000460726 1199 ntBASIC14.92□□□□□ -0.02
MMP28Q9H239 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
MMP28Q9H239 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
MMP28Q9H239 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MMP28Q9H239 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP28Q9H239 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP28Q9H239 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
MMP28Q9H239 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms