Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 AL645728.1-201ENST00000366221 2101 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 AC097637.2-201ENST00000624096 1997 ntBASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
POLR2J3Q9H1A7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 LINC00982-205ENST00000420957 435 ntBASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AC069148.1-201ENST00000608741 768 ntBASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AL139011.1-202ENST00000642063 584 ntBASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.61■□□□□ 0.09
POLR2J3Q9H1A7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 FAM210CP-201ENST00000445714 574 ntBASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 MIR5100-201ENST00000579544 119 ntBASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 NPAP1P7-201ENST00000613027 823 ntBASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms