Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AC079776.4-201ENST00000511039 504 ntBASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AC145285.3-201ENST00000564603 959 ntBASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 Z83851.2-201ENST00000609564 659 ntBASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AC006449.5-201ENST00000610658 2098 ntBASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCSER1Q9C0I3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 CRYGEP-201ENST00000412192 528 ntBASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCSER1Q9C0I3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 HMGA1P7-201ENST00000406908 502 ntBASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.78■□□□□ 0.6
CCSER1Q9C0I3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCSER1Q9C0I3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms