Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 AL645728.1-201ENST00000366221 2101 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 MKNK2P1-201ENST00000437526 628 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 MIR3687-2-201ENST00000577708 61 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 AL009183.1-201ENST00000603760 355 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 MIR3687-1-201ENST00000614492 61 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 C20orf181-201ENST00000623918 480 ntBASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM62Q9BVG3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 AC006538.1-201ENST00000567905 1585 ntBASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM62Q9BVG3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 YBX2P1-201ENST00000394192 760 ntBASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 AP002472.1-201ENST00000577490 586 ntBASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM62Q9BVG3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms