Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.97■■□□□ 1.11
ABCA3Q99758 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.96■■□□□ 1.11
ABCA3Q99758 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ABCA3Q99758 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.96■■□□□ 1.11
ABCA3Q99758 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.96■■□□□ 1.11
ABCA3Q99758 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.96■■□□□ 1.11
ABCA3Q99758 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
ABCA3Q99758 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.96■■□□□ 1.11
ABCA3Q99758 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.96■■□□□ 1.11
ABCA3Q99758 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 AC026979.3-201ENST00000607315 403 ntBASIC21.96■■□□□ 1.11
ABCA3Q99758 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ABCA3Q99758 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 AC098818.2-201ENST00000564925 2320 ntBASIC21.96■■□□□ 1.11
ABCA3Q99758 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ABCA3Q99758 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.96■■□□□ 1.11
ABCA3Q99758 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCA3Q99758 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ABCA3Q99758 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ABCA3Q99758 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.95■■□□□ 1.1
ABCA3Q99758 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.95■■□□□ 1.1
ABCA3Q99758 CSF2RBP1-201ENST00000447905 391 ntBASIC21.95■■□□□ 1.1
ABCA3Q99758 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.95■■□□□ 1.1
ABCA3Q99758 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.95■■□□□ 1.1
ABCA3Q99758 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.95■■□□□ 1.1
ABCA3Q99758 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.95■■□□□ 1.1
ABCA3Q99758 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.95■■□□□ 1.1
ABCA3Q99758 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ABCA3Q99758 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.95■■□□□ 1.1
ABCA3Q99758 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.95■■□□□ 1.1
ABCA3Q99758 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ABCA3Q99758 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.95■■□□□ 1.1
ABCA3Q99758 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ABCA3Q99758 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.94■■□□□ 1.1
ABCA3Q99758 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 RARRES2P5-201ENST00000564013 466 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 RN7SL219P-201ENST00000582872 296 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 AC243960.2-201ENST00000600996 747 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ABCA3Q99758 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 AL139099.5-201ENST00000635274 300 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 AL033527.5-201ENST00000641382 801 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 AC006277.1-201ENST00000624348 1610 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ABCA3Q99758 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.94■■□□□ 1.1
ABCA3Q99758 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.94■■□□□ 1.1
ABCA3Q99758 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ABCA3Q99758 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCA3Q99758 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCA3Q99758 KRT43P-201ENST00000434019 910 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 EEF1DP4-201ENST00000446006 880 ntBASIC21.94■■□□□ 1.1
ABCA3Q99758 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.94■■□□□ 1.1
ABCA3Q99758 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms