Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA3Q99618 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 KRT8P12-202ENST00000472924 1397 ntBASIC17.32■□□□□ 0.36
CDCA3Q99618 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA3Q99618 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 MIR658-201ENST00000385210 100 ntBASIC17.32■□□□□ 0.36
CDCA3Q99618 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDCA3Q99618 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.32■□□□□ 0.36
CDCA3Q99618 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA3Q99618 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDCA3Q99618 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.32■□□□□ 0.36
CDCA3Q99618 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.32■□□□□ 0.36
CDCA3Q99618 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.32■□□□□ 0.36
CDCA3Q99618 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 AC006277.1-201ENST00000624348 1610 ntBASIC17.32■□□□□ 0.36
CDCA3Q99618 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA3Q99618 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDCA3Q99618 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA3Q99618 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
CDCA3Q99618 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 SPDYE17-201ENST00000412399 783 ntBASIC17.31■□□□□ 0.36
CDCA3Q99618 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA3Q99618 AC022210.1-201ENST00000449856 793 ntBASIC17.31■□□□□ 0.36
CDCA3Q99618 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.31■□□□□ 0.36
CDCA3Q99618 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA3Q99618 SRD5A3P1-201ENST00000603021 949 ntBASIC17.31■□□□□ 0.36
CDCA3Q99618 AL033527.5-202ENST00000641632 1098 ntBASIC17.31■□□□□ 0.36
CDCA3Q99618 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 AL138688.1-201ENST00000624851 1594 ntBASIC17.31■□□□□ 0.36
CDCA3Q99618 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCA3Q99618 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA3Q99618 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 KRT8P39-201ENST00000396270 1433 ntBASIC17.3■□□□□ 0.36
CDCA3Q99618 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 TTTY23B-201ENST00000442790 549 ntBASIC17.3■□□□□ 0.36
CDCA3Q99618 RN7SL837P-201ENST00000463010 287 ntBASIC17.3■□□□□ 0.36
CDCA3Q99618 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.3■□□□□ 0.36
CDCA3Q99618 TPRX2P-201ENST00000535362 881 ntBASIC17.3■□□□□ 0.36
CDCA3Q99618 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.3■□□□□ 0.36
CDCA3Q99618 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 AC004790.1-201ENST00000612686 536 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms