Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC007389.4-201ENST00000454674 793 ntBASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC104989.1-201ENST00000519711 778 ntBASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 C2orf69P2-201ENST00000562032 1123 ntBASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC012569.1-201ENST00000591191 1524 ntBASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CSMD1Q96PZ7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 AC104457.1-201ENST00000401024 814 ntBASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 MIR3909-201ENST00000579518 119 ntBASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CSMD1Q96PZ7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 AC253536.4-201ENST00000440539 267 ntBASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 MIR1247-201ENST00000408206 136 ntBASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 MIR3615-201ENST00000581999 87 ntBASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 AC090164.3-201ENST00000610780 2143 ntBASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 BX276092.7-203ENST00000637198 1536 ntBASIC14.15□□□□□ -0.14
CSMD1Q96PZ7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 DUTP2-201ENST00000519164 463 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 AC007431.3-201ENST00000623221 587 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms