Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 UBALD1-205ENST00000590891 2641 ntBASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AL160237.2-201ENST00000556165 472 ntBASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 AC008894.3-201ENST00000624324 3103 ntBASIC15.71■□□□□ 0.11
MS4A4EQ96PG1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 AC131009.4-201ENST00000624048 1740 ntBASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 AL353732.1-201ENST00000569618 1459 ntBASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.71■□□□□ 0.1
MS4A4EQ96PG1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 MRPL20P1-201ENST00000400819 433 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC005412.3-201ENST00000580309 715 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 MIR4492-201ENST00000581627 80 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC104692.2-201ENST00000603054 253 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 MIR7706-201ENST00000613747 67 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 AC117500.6-201ENST00000624871 588 ntBASIC15.7■□□□□ 0.1
MS4A4EQ96PG1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms