Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF48Q96MX3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 HTR7P1-202ENST00000624664 4411 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 FAM8A3P-201ENST00000427218 844 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AL671277.1-201ENST00000429656 993 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AC140658.5-201ENST00000438532 169 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 KRT8P48-201ENST00000515599 1220 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AC026120.1-201ENST00000611536 926 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 LINC00628-201ENST00000628516 1289 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 AL645728.2-201ENST00000641974 660 ntBASIC13.7□□□□□ -0.22
ZNF48Q96MX3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF48Q96MX3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC068418.2-201ENST00000577309 3703 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AL627223.1-201ENST00000416693 442 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 SPCS2P1-201ENST00000561636 679 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC011467.4-201ENST00000594891 528 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC092364.2-202ENST00000597012 1073 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 AC116353.5-201ENST00000638148 1699 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF48Q96MX3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.69□□□□□ -0.22
ZNF48Q96MX3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms