Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.86■□□□□ 0.45
TIFAQ96CG3 FOXO1B-201ENST00000504678 1527 ntBASIC17.86■□□□□ 0.45
TIFAQ96CG3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.86■□□□□ 0.45
TIFAQ96CG3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
TIFAQ96CG3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
TIFAQ96CG3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIFAQ96CG3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 AC007389.4-201ENST00000454674 793 ntBASIC17.85■□□□□ 0.45
TIFAQ96CG3 SPDYE18-201ENST00000510091 1050 ntBASIC17.85■□□□□ 0.45
TIFAQ96CG3 PRYP6-201ENST00000514804 343 ntBASIC17.85■□□□□ 0.45
TIFAQ96CG3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIFAQ96CG3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TIFAQ96CG3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AC104989.1-201ENST00000519711 778 ntBASIC17.84■□□□□ 0.45
TIFAQ96CG3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AL133215.2-201ENST00000609242 977 ntBASIC17.84■□□□□ 0.45
TIFAQ96CG3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 AC138028.4-201ENST00000564984 1845 ntBASIC17.84■□□□□ 0.45
TIFAQ96CG3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIFAQ96CG3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TIFAQ96CG3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.83■□□□□ 0.45
TIFAQ96CG3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.83■□□□□ 0.45
TIFAQ96CG3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TIFAQ96CG3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.83■□□□□ 0.45
TIFAQ96CG3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TIFAQ96CG3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms