Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP6V0A1Q93050 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 FAM86GP-201ENST00000448322 971 ntBASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 AC109635.5-201ENST00000533593 962 ntBASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 AL135744.1-201ENST00000565098 629 ntBASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CYP2A7P1-201ENST00000595391 815 ntBASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP6V0A1Q93050 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 RNU1-129P-201ENST00000384064 167 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AP002490.2-201ENST00000524791 560 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AC243562.1-201ENST00000560672 389 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 RARRES2P8-201ENST00000566335 367 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 MIR3909-201ENST00000579518 119 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 U1.21-201ENST00000580816 167 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AL009183.1-201ENST00000603760 355 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 AL161645.1-201ENST00000622716 1255 ntBASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP6V0A1Q93050 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP6V0A1Q93050 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms