Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 AC073347.1-201ENST00000421633 2643 ntBASIC14.89□□□□□ -0.03
AP3S1Q92572 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP3S1Q92572 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S1Q92572 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.89□□□□□ -0.03
AP3S1Q92572 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 ESRRAP1-201ENST00000400596 1257 ntBASIC14.88□□□□□ -0.03
AP3S1Q92572 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 AC109462.3-201ENST00000573934 613 ntBASIC14.88□□□□□ -0.03
AP3S1Q92572 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.88□□□□□ -0.03
AP3S1Q92572 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.88□□□□□ -0.03
AP3S1Q92572 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 AC097374.2-201ENST00000618617 1306 ntBASIC14.88□□□□□ -0.03
AP3S1Q92572 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.88□□□□□ -0.03
AP3S1Q92572 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP3S1Q92572 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP3S1Q92572 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S1Q92572 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S1Q92572 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S1Q92572 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
AP3S1Q92572 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S1Q92572 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S1Q92572 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.87□□□□□ -0.03
AP3S1Q92572 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 AC010653.2-201ENST00000623505 997 ntBASIC14.87□□□□□ -0.03
AP3S1Q92572 AL157888.1-201ENST00000631930 593 ntBASIC14.87□□□□□ -0.03
AP3S1Q92572 AC073648.6-201ENST00000641589 218 ntBASIC14.87□□□□□ -0.03
AP3S1Q92572 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 AP005117.1-202ENST00000581724 1908 ntBASIC14.87□□□□□ -0.03
AP3S1Q92572 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 AC010491.1-201ENST00000563101 2797 ntBASIC14.87□□□□□ -0.03
AP3S1Q92572 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms