Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 AL033527.5-202ENST00000641632 1098 ntBASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 EIF4HP1-201ENST00000453115 687 ntBASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 AC092337.1-201ENST00000568699 1129 ntBASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRUNE2Q8WUY3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 LINC00895-201ENST00000629028 1637 ntBASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC091271.1-201ENST00000611877 1162 ntBASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 SLC25A24P2-201ENST00000415059 510 ntBASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRUNE2Q8WUY3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AL022328.1-201ENST00000610050 478 ntBASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AKR7A2P1-201ENST00000460134 915 ntBASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 WIZP1-201ENST00000531444 2299 ntBASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRUNE2Q8WUY3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.27■□□□□ 0.36
PRUNE2Q8WUY3 AC005695.3-201ENST00000614522 232 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms