Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 BCRP1-201ENST00000444246 691 ntBASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 FAM86GP-201ENST00000448322 971 ntBASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 AC005498.2-205ENST00000593218 784 ntBASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 Z92544.3-201ENST00000624747 417 ntBASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHKBP1Q8TBC3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 KRT18P32-201ENST00000424695 1287 ntBASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 AL161645.1-201ENST00000622716 1255 ntBASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHKBP1Q8TBC3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 SPCS2P4-201ENST00000436160 681 ntBASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 AC015911.4-201ENST00000588022 1070 ntBASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 AL096865.1-201ENST00000606796 927 ntBASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 SLC22A20-204ENST00000530038 1673 ntBASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHKBP1Q8TBC3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms