Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 AC073592.5-201ENST00000624854 528 ntBASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 AC105917.1-201ENST00000506637 2539 ntBASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 DUSP5P1-201ENST00000441325 1139 ntBASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP61Q8NHU2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 MYCLP1-201ENST00000372451 1075 ntBASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 ABCD1P5-201ENST00000445663 754 ntBASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 IFNL4P1-201ENST00000607083 540 ntBASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 AL139327.4-201ENST00000612362 153 ntBASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP61Q8NHU2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms