Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 AL773604.1-201ENST00000617417 272 ntBASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 AC078925.2-201ENST00000624013 1973 ntBASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 AC006557.2-201ENST00000592985 1240 ntBASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 LINC00554-201ENST00000564841 3011 ntBASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SIMC1Q8NDZ2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AP000347.1-202ENST00000435868 847 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 PAWRP1-201ENST00000451083 565 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AC092910.1-201ENST00000482027 1129 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 RPS15P9-201ENST00000494093 319 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AC105339.3-201ENST00000560043 636 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 TERC-201ENST00000602385 541 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AL356488.2-201ENST00000602755 427 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 AC116407.3-201ENST00000623905 1129 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 PI4KAP1-204ENST00000612579 1703 ntBASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SIMC1Q8NDZ2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 AC117500.6-201ENST00000624871 588 ntBASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms