Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 HLA-J-202ENST00000469281 1241 ntBASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC4Q8N9L1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 RNU1-129P-201ENST00000384064 167 ntBASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AC074386.1-202ENST00000463561 864 ntBASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AC040169.1-201ENST00000565382 521 ntBASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 U1.21-201ENST00000580816 167 ntBASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC4Q8N9L1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 AC092919.2-201ENST00000623631 1645 ntBASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 AC140658.5-201ENST00000438532 169 ntBASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC4Q8N9L1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms