Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 UXT-AS1-201ENST00000590504 1525 ntBASIC17.09■□□□□ 0.33
PGBD3Q8N328 AC012569.1-201ENST00000591191 1524 ntBASIC17.09■□□□□ 0.33
PGBD3Q8N328 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PGBD3Q8N328 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 AC139713.2-201ENST00000641328 2723 ntBASIC17.09■□□□□ 0.33
PGBD3Q8N328 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PGBD3Q8N328 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.08■□□□□ 0.33
PGBD3Q8N328 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PGBD3Q8N328 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 RBPMS2P1-201ENST00000437762 623 ntBASIC17.08■□□□□ 0.32
PGBD3Q8N328 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 AC005412.3-201ENST00000580309 715 ntBASIC17.08■□□□□ 0.32
PGBD3Q8N328 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PGBD3Q8N328 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PGBD3Q8N328 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 AKAP8P1-201ENST00000434743 1349 ntBASIC17.07■□□□□ 0.32
PGBD3Q8N328 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 HMGA1P7-201ENST00000406908 502 ntBASIC17.07■□□□□ 0.32
PGBD3Q8N328 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 PMS2P4-201ENST00000412466 1052 ntBASIC17.07■□□□□ 0.32
PGBD3Q8N328 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 AC243562.1-201ENST00000560672 389 ntBASIC17.07■□□□□ 0.32
PGBD3Q8N328 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 AC138761.1-201ENST00000584393 385 ntBASIC17.07■□□□□ 0.32
PGBD3Q8N328 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PGBD3Q8N328 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
PGBD3Q8N328 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 LINC00304-203ENST00000565008 1864 ntBASIC17.06■□□□□ 0.32
PGBD3Q8N328 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 TUBB3P1-201ENST00000405796 1332 ntBASIC17.06■□□□□ 0.32
PGBD3Q8N328 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 MIR943-201ENST00000401286 94 ntBASIC17.06■□□□□ 0.32
PGBD3Q8N328 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.06■□□□□ 0.32
PGBD3Q8N328 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms