Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 CROCCP4-201ENST00000457096 498 ntBASIC20.18■□□□□ 0.82
SLX4Q8IY92 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.18■□□□□ 0.82
SLX4Q8IY92 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLX4Q8IY92 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 AC010319.3-201ENST00000597028 470 ntBASIC20.17■□□□□ 0.82
SLX4Q8IY92 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 TUBB8P12-201ENST00000308911 1335 ntBASIC20.17■□□□□ 0.82
SLX4Q8IY92 TUBB7P-202ENST00000428444 1305 ntBASIC20.17■□□□□ 0.82
SLX4Q8IY92 TUBB8P7-204ENST00000567960 1332 ntBASIC20.17■□□□□ 0.82
SLX4Q8IY92 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 KRT8P39-201ENST00000396270 1433 ntBASIC20.17■□□□□ 0.82
SLX4Q8IY92 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLX4Q8IY92 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
SLX4Q8IY92 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 AC135050.7-201ENST00000624508 2218 ntBASIC20.16■□□□□ 0.82
SLX4Q8IY92 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.16■□□□□ 0.82
SLX4Q8IY92 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 AC093726.1-201ENST00000608064 963 ntBASIC20.16■□□□□ 0.82
SLX4Q8IY92 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLX4Q8IY92 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 AC006277.1-201ENST00000624348 1610 ntBASIC20.15■□□□□ 0.82
SLX4Q8IY92 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLX4Q8IY92 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.15■□□□□ 0.82
SLX4Q8IY92 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms